Browsing Norwegian Institute of Public Health Open Repository by Author "Frye, Stephan Alfons"
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A genomic view of experimental intra- and interspecies transformation of a rifampicin resistance allele into Neisseria meningitidis
Alfsnes, Kristian; Frye, Stephan Alfons; Eriksson, JE; Tonjum, Tone; Eldholm, Vegard; Brynildsrud, Ola Brønstad; Bohlin, Jon; Harrison, OB; Hood, D; Maiden, Martin C.J.; Ambur, Ole Herman (Peer reviewed; Journal article, 2018)The spread of antibiotic resistance within and between different bacterial populations is a major health problem on a global scale. The identification of genetic transformation in genomic data from Neisseria meningitidis, ... -
AMR-Diag: Neural network based genotype-to-phenotype prediction of resistance towards β-lactams in Escherichia coli and Klebsiella pneumoniae
Avershina, Ekaterina; Sharma, Priyanka; Taxt, Arne Michael; Singh, Harpreet; Frye, Stephan Alfons; Paul, Kolin; Kapil, Arti; Naseer, Mohammed Umaer; Kaur, Punit; Ahmad, Rafi (Peer reviewed; Journal article, 2021) -
Rapid identification of pathogens, antibiotic resistance genes and plasmids in blood cultures by nanopore sequencing
Taxt, Arne Michael; Avershina, Ekaterina; Frye, Stephan Alfons; Naseer, Mohammed Umaer; Ahmad, Rafi (Peer reviewed; Journal article, 2020)Bloodstream infections (BSI) and sepsis are major causes of morbidity and mortality worldwide. Blood culture-based diagnostics usually requires 1–2 days for identification of bacterial agent and an additional 2–3 days for ...